RNAi phenotypes

rnaiPhenotypes(version = NULL, progress = FALSE)

Arguments

version

character(1) or NULL. WormBase version. If NULL (recommended), defaults to current production release version available on the WormBase website. Legacy versions can be specified as a character string (e.g. "WS262").

progress

logical(1). Show progress using pbapply package.

Value

tbl_df.

Examples

x <- rnaiPhenotypes()
#> Transmitting files from ftp.wormbase.org.
#> Files matching pattern: #> rnai_phenotypes_quick.WS269.wb
#> Downloading rnai_phenotypes_quick.WS269.wb.gz.
#> Parsed with column specification: #> cols( #> geneID = col_character(), #> sequence = col_character(), #> rnaiPhenotypes = col_character() #> )
glimpse(x)
#> Observations: 7,900 #> Variables: 2 #> $ geneID <chr> "WBGene00000001", "WBGene00000004", "WBGene00000005", … #> $ rnaiPhenotypes <list> [<"dauer induction variant", "hermaphrodite sterile">…